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LOC389831 uncharacterized LOC389831 [ Homo sapiens (human) ]

Gene ID: 389831, updated on 5-Mar-2024

Summary

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Gene symbol
LOC389831
Gene description
uncharacterized LOC389831
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
all
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Genomic context

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Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Unplaced Scaffold NT_113901.1 (42938..86735, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (1909592..1953351)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 Unlocalized Scaffold NT_113901.1 (42938..86735, complement)

NT_113901.1Genomic Context describing neighboring genes Neighboring gene C-terminal-binding protein 2-like Neighboring gene uncharacterized LOC105379275 Neighboring gene vomeronasal 1 receptor 44 pseudogene

NW_021160013.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124905468 Neighboring gene carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2-like Neighboring gene uncharacterized LOC124905469 Neighboring gene C-terminal-binding protein 2-like Neighboring gene uncharacterized LOC124905471

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Homology

Clone Names

  • FLJ23285

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_144628.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC011043, BF433147

  2. NR_187193.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    MG910336

  3. NR_187194.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    MG910336

  4. NR_187195.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    MG910336

  5. NR_187196.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    MG910336

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NT_113901.1 Reference GRCh38.p14 Primary Assembly

    Range
    42938..86735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_009530076.1 RNA Sequence

  2. XR_009530074.1 RNA Sequence

  3. XR_009530071.1 RNA Sequence

  4. XR_009530072.1 RNA Sequence

  5. XR_009530073.1 RNA Sequence

  6. XR_009530070.1 RNA Sequence

  7. XR_009530075.1 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160013.1 Reference GRCh38.p14 PATCHES

    Range
    206505..250301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_009530078.1 RNA Sequence

  2. XR_009530081.1 RNA Sequence

  3. XR_009530077.1 RNA Sequence

  4. XR_009530079.1 RNA Sequence

  5. XR_009530080.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    1909592..1953351
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001242480.3: Suppressed sequence

    Description
    NM_001242480.3: This RefSeq was removed because it is now thought that this gene does not encode a protein.

  2. NM_001347680.2: Suppressed sequence

    Description
    NM_001347680.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.

  3. NM_001347681.2: Suppressed sequence

    Description
    NM_001347681.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.

  4. NM_001347682.2: Suppressed sequence

    Description
    NM_001347682.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.
Nucleotide Protein
Heading Accession and Version

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