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ADGRF5P1 adhesion G protein-coupled receptor F5 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 389740, updated on 16-Jan-2024

Summary

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Official Symbol
ADGRF5P1provided by HGNC
Official Full Name
adhesion G protein-coupled receptor F5 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:32922
See related
Ensembl:ENSG00000227582 AllianceGenome:HGNC:32922
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GPR116P1
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Genomic context

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Location:
9q13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (62860848..62862194, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (80319754..80321100)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (66516672..66518018, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene PTGER4P2-CDK2AP2P2 readthrough, transcribed pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66500322-66500855 Neighboring gene cyclin dependent kinase 2 associated protein 2 pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:66508451-66508950 Neighboring gene myosin VB pseudogene 2 Neighboring gene lncRNA negative regulator of fibroblast-like synoviocyte migration, SYNCRIP interacting Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr9:66530343-66531053 Neighboring gene fibroblast growth factor 7 pseudogene 8 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28435 Neighboring gene family with sequence similarity 88 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • G protein-coupled receptor 116 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021620.2 

    Range
    101..1447
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    62860848..62862194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    80319754..80321100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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