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KRT18P11 keratin 18 pseudogene 11 [ Homo sapiens (human) ]

Gene ID: 3876, updated on 10-Oct-2023

Summary

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Official Symbol
KRT18P11provided by HGNC
Official Full Name
keratin 18 pseudogene 11provided by HGNC
Primary source
HGNC:HGNC:6431
See related
Ensembl:ENSG00000215089 AllianceGenome:HGNC:6431
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KRT18L1
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Genomic context

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Location:
Xq21.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (92459611..92461009)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (90909917..90911315)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (91714610..91716008)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene protocadherin 11 X-linked Neighboring gene voltage dependent anion channel 1 pseudogene 3 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:91354906-91355678 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:91355679-91356451 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:91357997-91358770 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:91358771-91359542 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:91360316-91361087 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:91365337-91366118 Neighboring gene eukaryotic translation initiation factor 4A1 pseudogene 10 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:91417763-91418440 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:91525883-91526412 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:91715176-91715676 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:91796763-91796972 Neighboring gene sorting nexin 3 pseudogene 1 X-linked Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:91844408-91845108 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:91845109-91845809 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:91845810-91846510 Neighboring gene ribosomal protein L26 pseudogene 36

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. Choudhury NR, et al. BMC Biol, 2017 Nov 8. PMID 29117863, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Other Names

  • keratin 18-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005219.5 

    Range
    101..1499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    92459611..92461009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    90909917..90911315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_032934.1: Suppressed sequence

    Description
    NM_032934.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version

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