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KRASP1 KRAS proto-oncogene, GTPase pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 3844, updated on 10-Oct-2023

Summary

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Official Symbol
KRASP1provided by HGNC
Official Full Name
KRAS proto-oncogene, GTPase pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:6406
See related
AllianceGenome:HGNC:6406
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KRAS1P; c-Kras1
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Genomic context

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See KRASP1 in Genome Data Viewer
Location:
6p12.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (54770474..54775706)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (54610176..54615402)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (54635272..54640504)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein L10 pseudogene 10 Neighboring gene uncharacterized LOC107986606 Neighboring gene ribosomal protein SA pseudogene 44 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:54601265-54601766 Neighboring gene RNA, U6 small nuclear 1023, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:54688802-54689302 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:54689303-54689803 Neighboring gene family with sequence similarity 83 member B Neighboring gene Sharpr-MPRA regulatory region 2673

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A fragment of the human c-Ki-ras1 pseudogene (HGM9 gene symbol KRAS1P), localized to 6p12-p11, detects 3 allele, RFLP. Blanché H, et al. Nucleic Acids Res, 1988 Feb 25. PMID 2894641, Free PMC Article
  2. A coding-independent function of gene and pseudogene mRNAs regulates tumour biology. Poliseno L, et al. Nature, 2010 Jun 24. PMID 20577206, Free PMC Article
  3. Regional chromosomal localization of N-ras, K-ras-1, K-ras-2 and myb oncogenes in human cells. McBride OW, et al. Nucleic Acids Res, 1983 Dec 10. PMID 6672765, Free PMC Article
  4. Structure and organization of the human Ki-ras proto-oncogene and a related processed pseudogene. McGrath JP, et al. Nature, 1983 Aug 11-17. PMID 6308466
  5. lncRNAdb: a reference database for long noncoding RNAs. Amaral PP, et al. Nucleic Acids Res, 2011 Jan. PMID 21112873, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • Kirsten rat sarcoma viral oncogene homolog pseudogene 1 (functional)
  • Kirsten rat sarcoma-1 viral (v-Ki-ras1) oncogene homolog, processed
  • v-Ki-ras1 Kirsten rat sarcoma 1 viral oncogene homolog, processed pseudogene
  • v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001154.4 

    Range
    101..5333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    54770474..54775706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    54610176..54615402
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_004420.1: Suppressed sequence

    Description
    NR_004420.1: This RefSeq was permanently suppressed because it is now thought that this gene is a inactive pseudogene.
Nucleotide Protein
Heading Accession and Version

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