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Rpl21-ps4 ribosomal protein L21, pseudogene 4 [ Mus musculus (house mouse) ]

Gene ID: 382843, updated on 8-Feb-2024

Summary

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Official Symbol
Rpl21-ps4provided by MGI
Official Full Name
ribosomal protein L21, pseudogene 4provided by MGI
Primary source
MGI:MGI:3646825
See related
Ensembl:ENSMUSG00000072714 AllianceGenome:MGI:3646825
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm5201; EG382843
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Genomic context

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See Rpl21-ps4 in Genome Data Viewer
Location:
14 A1; 14 6.33 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (11241748..11242260, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (11227513..11228025)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_35915 Neighboring gene microRNA 5124b Neighboring gene STARR-seq mESC enhancer starr_35914 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase, retrotransposed Neighboring gene Slc25a5 retrotransposed pseudogene Neighboring gene STARR-seq mESC enhancer starr_35913 Neighboring gene STARR-seq mESC enhancer starr_35912 Neighboring gene STARR-seq mESC enhancer starr_35911 Neighboring gene fragile histidine triad gene Neighboring gene STARR-seq mESC enhancer starr_35910 Neighboring gene STARR-seq mESC enhancer starr_35909 Neighboring gene STARR-seq mESC enhancer starr_35908 Neighboring gene STARR-seq mESC enhancer starr_35907 Neighboring gene STARR-seq mESC enhancer starr_35906 Neighboring gene fragile histidine triad gene, opposite strand

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • ribosomal protein L21 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007421.1 

    Range
    101..613
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    11241748..11242260 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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