U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm5150 predicted gene 5150 [ Mus musculus (house mouse) ]

Gene ID: 381484, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
Gm5150provided by MGI
Official Full Name
predicted gene 5150provided by MGI
Primary source
MGI:MGI:3779469
See related
Ensembl:ENSMUSG00000078780 AllianceGenome:MGI:3779469
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to be involved in positive regulation of T cell activation and positive regulation of phagocytosis. Predicted to be active in plasma membrane. Orthologous to human SIRPB2 (signal regulatory protein beta 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
3 A1; 3 3.91 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (16001035..16060535, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (15946871..16006371, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_07028 Neighboring gene eukaryotic translation initiation factor 3, subunit M pseudogene Neighboring gene STARR-seq mESC enhancer starr_07029 Neighboring gene STARR-seq mESC enhancer starr_07030 Neighboring gene phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase pseudogene Neighboring gene STARR-seq mESC enhancer starr_07031 Neighboring gene STARR-seq mESC enhancer starr_07032 Neighboring gene STARR-seq mESC enhancer starr_07033 Neighboring gene STARR-seq mESC enhancer starr_07034 Neighboring gene STARR-seq mESC enhancer starr_07036 Neighboring gene STARR-seq mESC enhancer starr_07037 Neighboring gene STARR-positive B cell enhancer ABC_E2660 Neighboring gene STARR-seq mESC enhancer starr_07038 Neighboring gene STARR-seq mESC enhancer starr_07039 Neighboring gene STARR-seq mESC enhancer starr_07040 Neighboring gene STARR-seq mESC enhancer starr_07041 Neighboring gene YTH N6-methyladenosine RNA binding protein 3 Neighboring gene STARR-seq mESC enhancer starr_07042 Neighboring gene STARR-seq mESC enhancer starr_07043 Neighboring gene STARR-seq mESC enhancer starr_07044 Neighboring gene STARR-seq mESC enhancer starr_07045 Neighboring gene STARR-seq mESC enhancer starr_07046 Neighboring gene STARR-seq mESC enhancer starr_07050 Neighboring gene STARR-seq mESC enhancer starr_07051 Neighboring gene STARR-seq mESC enhancer starr_07052 Neighboring gene STARR-seq mESC enhancer starr_07053 Neighboring gene STARR-seq mESC enhancer starr_07054 Neighboring gene STARR-seq mESC enhancer starr_07055 Neighboring gene predicted gene, 30223 Neighboring gene predicted gene, 26485

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Signal regulatory protein molecules are differentially expressed by CD8- dendritic cells. Lahoud MH, et al. J Immunol, 2006 Jul 1. PMID 16785533
  2. Irisin Mediates Effects on Bone and Fat via αV Integrin Receptors. Kim H, et al. Cell, 2018 Dec 13. PMID 30550785, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in positive regulation of T cell activation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in positive regulation of phagocytosis IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC381484
Names
SIRP beta 1 like 1 protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081687.1 → NP_001075156.1  uncharacterized protein LOC381484 precursor

    See identical proteins and their annotated locations for NP_001075156.1

    Status: PREDICTED

    Source sequence(s)
    DQ055451
    Consensus CDS
    CCDS38395.1
    UniProtKB/TrEMBL
    Q1AN92
    Related
    ENSMUSP00000103984.3, ENSMUST00000108347.3
    Conserved Domains (1) summary
    cl11960
    Location:32 → 143
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    16001035..16060535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036163147.1 → XP_036019040.1  uncharacterized protein LOC381484 isoform X3

    Conserved Domains (2) summary
    cd00096
    Location:32 → 35
    Ig; Ig strand A [structural motif]
    cl11960
    Location:32 → 143
    Ig; Immunoglobulin domain

  2. XM_006535488.1 → XP_006535551.1  uncharacterized protein LOC381484 isoform X4

    Conserved Domains (1) summary
    cl11960
    Location:32 → 143
    Ig; Immunoglobulin domain

  3. XM_006535485.1 → XP_006535548.1  uncharacterized protein LOC381484 isoform X1

    See identical proteins and their annotated locations for XP_006535548.1

    UniProtKB/TrEMBL
    Q1AN92
    Related
    ENSMUSP00000141397.2, ENSMUST00000194367.6
    Conserved Domains (1) summary
    cl11960
    Location:32 → 143
    Ig; Immunoglobulin domain

  4. XM_011249685.1 → XP_011247987.1  uncharacterized protein LOC381484 isoform X2

    Conserved Domains (1) summary
    cl11960
    Location:32 → 143
    Ig; Immunoglobulin domain

RNA

  1. XR_389592.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools
Miscellaneous