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Npw neuropeptide W [ Mus musculus (house mouse) ]

Gene ID: 381073, updated on 5-Mar-2024

Summary

Official Symbol
Npwprovided by MGI
Official Full Name
neuropeptide Wprovided by MGI
Primary source
MGI:MGI:2685781
See related
Ensembl:ENSMUSG00000071230 AllianceGenome:MGI:2685781
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm935
Summary
Orthologs of this gene express a preproprotein that is processed into a neuropeptide ligand for two G-protein coupled receptors in the central nervous system. The neuropeptide is thought to directly or indirectly regulate feeding, weight regulation, and pain response. The preproprotein is translated using a non-AUG initiation codon. [provided by RefSeq, Jul 2008]
Expression
Biased expression in stomach adult (RPKM 51.2) and lung adult (RPKM 38.0) See more
Orthologs
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Genomic context

Location:
17 A3.3; 17 12.45 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (24876303..24877526, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (24657329..24658552, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:24769632-24769741 Neighboring gene nth (endonuclease III)-like 1 (E.coli) Neighboring gene NHERF family PDZ scaffold protein 2 Neighboring gene zinc finger protein 598 Neighboring gene STARR-positive B cell enhancer ABC_E11630 Neighboring gene synaptogyrin 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (2) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in feeding behavior IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in feeding behavior ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001099664.2NP_001093134.1  neuropeptide W preproprotein

    Status: VALIDATED

    Source sequence(s)
    AC154566
    Consensus CDS
    CCDS50017.1
    UniProtKB/TrEMBL
    F7B5D6
    Related
    ENSMUSP00000093200.5, ENSMUST00000095544.6
    Conserved Domains (1) summary
    pfam15180
    Location:34140
    NPBW; Neuropeptides B and W

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    24876303..24877526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)