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D830013O20Rik RIKEN cDNA D830013O20 gene [ Mus musculus (house mouse) ]

Gene ID: 380765, updated on 8-Feb-2024

Summary

Official Symbol
D830013O20Rikprovided by MGI
Official Full Name
RIKEN cDNA D830013O20 geneprovided by MGI
Primary source
MGI:MGI:2685737
See related
Ensembl:ENSMUSG00000056359 AllianceGenome:MGI:2685737
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm891
Expression
Biased expression in heart adult (RPKM 1.9) and testis adult (RPKM 0.1) See more
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Genomic context

Location:
12 C3; 12 30.44 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (73410849..73456337, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (73364075..73409563, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene menage a trois 1 Neighboring gene cytochrome c oxidase subunit 7A2, mitochondrial pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E9148 Neighboring gene STARR-seq mESC enhancer starr_32467 Neighboring gene TRM5 tRNA methyltransferase 5 Neighboring gene solute carrier family 38, member 6 Neighboring gene STARR-seq mESC enhancer starr_32469 Neighboring gene predicted gene, 40442 Neighboring gene predicted gene, 33929 Neighboring gene predicted gene, 34080 Neighboring gene STARR-seq mESC enhancer starr_32473 Neighboring gene predicted gene, 34016

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046013.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC159813, AK085818
    Related
    ENSMUST00000221180.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    73410849..73456337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)