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Nanos2 nanos C2HC-type zinc finger 2 [ Mus musculus (house mouse) ]

Gene ID: 378430, updated on 21-Apr-2024

Summary

Official Symbol
Nanos2provided by MGI
Official Full Name
nanos C2HC-type zinc finger 2provided by MGI
Primary source
MGI:MGI:2676627
See related
Ensembl:ENSMUSG00000051965 AllianceGenome:MGI:2676627
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
nos2
Summary
Enables mRNA binding activity. Involved in germ-line stem cell population maintenance; mRNA catabolic process; and negative regulation of meiotic nuclear division. Acts upstream of or within spermatogenesis. Located in P-body and perinuclear region of cytoplasm. Is expressed in early conceptus; gonad; and telencephalon. Orthologous to human NANOS2 (nanos C2HC-type zinc finger 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
7 A3; 7 9.45 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (18721449..18722887)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (18987524..18988962)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 61 Neighboring gene STARR-positive B cell enhancer ABC_E66 Neighboring gene STARR-seq mESC enhancer starr_18181 Neighboring gene NOVA alternative splicing regulator 2 Neighboring gene STARR-seq mESC enhancer starr_18182 Neighboring gene predicted gene, 38952 Neighboring gene STARR-positive B cell enhancer ABC_E1080 Neighboring gene Myb-related transcription factor, partner of profilin Neighboring gene interferon regulatory factor 2 binding protein 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables mRNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in P-body IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
is_active_in perinuclear region of cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
nanos homolog 2
Names
NOS-2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_194064.2NP_918953.2  nanos homolog 2

    See identical proteins and their annotated locations for NP_918953.2

    Status: VALIDATED

    Source sequence(s)
    AC170864
    Consensus CDS
    CCDS20883.1
    UniProtKB/Swiss-Prot
    F8VQ09, P60322
    UniProtKB/TrEMBL
    I6ZHM2
    Related
    ENSMUSP00000069765.8, ENSMUST00000063563.9
    Conserved Domains (1) summary
    pfam05741
    Location:61113
    zf-nanos; Nanos RNA binding domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    18721449..18722887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)