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CG3907 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37832, updated on 4-Apr-2024

Summary

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Official Symbol
CG3907provided by FlyBase
Primary source
FLYBASE:FBgn0034958
Locus tag
Dmel_CG3907
See related
AllianceGenome:FB:FBgn0034958
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG3907
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Genomic context

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Location:
60B3-60B4; 2-106 cM
Exon count:
8
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (24019898..24022298, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (19907421..19909821, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Radial spoke head protein 4a Neighboring gene Xyloside xylosyltransferase Neighboring gene antisense RNA:CR45350 Neighboring gene Adenylate kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article
  2. An expanded toolkit for Drosophila gene tagging using synthesized homology donor constructs for CRISPR-mediated homologous recombination. Kanca O, et al. Elife, 2022 Jun 20. PMID 35723254, Free PMC Article
  3. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662
  4. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747, Free PMC Article
  5. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG3907-PA
CG3907-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    24019898..24022298 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_138026.4 → NP_611870.3  uncharacterized protein Dmel_CG3907, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611870.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6IDE2
    Related
    FBpp0072104
    Conserved Domains (1) summary
    pfam04740
    Location:147 → 351
    LXG; LXG domain of WXG superfamily

  2. NM_166647.3 → NP_726398.2  uncharacterized protein Dmel_CG3907, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726398.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6IDE2
    Related
    FBpp0072105
    Conserved Domains (1) summary
    pfam04740
    Location:147 → 351
    LXG; LXG domain of WXG superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6IDE2 Q6IDE2

Gene LinkOut

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Other Literature Sources
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