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DMBT1L1 deleted in malignant brain tumors 1 like 1 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 375940, updated on 5-Mar-2024

Summary

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Official Symbol
DMBT1L1provided by HGNC
Official Full Name
deleted in malignant brain tumors 1 like 1 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:49497
See related
Ensembl:ENSG00000293538 AllianceGenome:HGNC:49497
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DMBT1P1
Expression
Low expression observed in reference dataset See more
Orthologs
all
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Genomic context

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See DMBT1L1 in Genome Data Viewer
Location:
10q26.13
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (122756694..122797645)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (123631736..123672699)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (124516210..124557161)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene spermadhesin family member Neighboring gene chromosome 10 open reading frame 120 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:124527221-124527722 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:124527723-124528222 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:124539143-124539651 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:124556394-124557593 Neighboring gene deleted in malignant brain tumors 1 protein-like Neighboring gene FAM24B-CUZD1 readthrough Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:124605161-124605662 Neighboring gene CUB and zona pellucida like domains 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. The DNA sequence and comparative analysis of human chromosome 10. Deloukas P, et al. Nature, 2004 May 27. PMID 15164054

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Homology

Other Names

  • ZP domain-containing protein LOC729800-like
  • deleted in malignant brain tumors 1 pseudogene 1
  • putative ZP domain-containing protein LOC729800

Clone Names

  • FLJ46361

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003570.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK128228, AL731543
    Related
    ENST00000439464.6

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    122756694..122797645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    123631736..123672699
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_005514.1: Suppressed sequence

    Description
    NG_005514.1: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.

  2. NG_025545.1: Suppressed sequence

    Description
    NG_025545.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.

  3. NM_198577.1: Suppressed sequence

    Description
    NM_198577.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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