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CYCSP43 CYCS pseudogene 43 [ Homo sapiens (human) ]

Gene ID: 360187, updated on 10-Oct-2023

Summary

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Official Symbol
CYCSP43provided by HGNC
Official Full Name
CYCS pseudogene 43provided by HGNC
Primary source
HGNC:HGNC:24417
See related
AllianceGenome:HGNC:24417
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HCP43
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Genomic context

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Location:
Xq13.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (69485326..69485722, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (67918747..67919143, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (68705169..68705565, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68409565-68410066 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68410067-68410566 Neighboring gene long intergenic non-protein coding RNA 269 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68437057-68437556 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68442199-68442970 Neighboring gene high mobility group nucleosome binding domain 1 pseudogene 35 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68475969-68476469 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68476955-68477456 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:68482961-68483512 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:68483513-68484063 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:68484064-68484614 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:68500351-68500533 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68505841-68506822 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:68509810-68510701 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68513310-68513810 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68513811-68514311 Neighboring gene NANOG hESC enhancer GRCh37_chrX:68525339-68525849 Neighboring gene NANOG hESC enhancer GRCh37_chrX:68597698-68598220 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20887 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68668613-68669113 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:68725122-68725295 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68726227-68726726 Neighboring gene MPRA-validated peak7391 silencer Neighboring gene NALCN channel auxiliary factor 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20888 Neighboring gene RNA, 5S ribosomal pseudogene 506 Neighboring gene ectodysplasin A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. Zhang Z, et al. Gene, 2003 Jul 17. PMID 12909341

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • cytochrome c, somatic pseudogene 43

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002992.4 

    Range
    101..497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    69485326..69485722 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    67918747..67919143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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