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CYCSP17 CYCS pseudogene 17 [ Homo sapiens (human) ]

Gene ID: 360172, updated on 10-Oct-2023

Summary

Official Symbol
CYCSP17provided by HGNC
Official Full Name
CYCS pseudogene 17provided by HGNC
Primary source
HGNC:HGNC:24390
See related
AllianceGenome:HGNC:24390
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HCP17
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Genomic context

Location:
6q16.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (95504122..95504691)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (96675069..96675638)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (95951998..95952567)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:95220312-95221204 Neighboring gene MT-CYB pseudogene 36 Neighboring gene uncharacterized LOC105377901 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:95263598-95264402 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:95266514-95267437 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:95268361-95269283 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:95269284-95270205 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24838 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:95534248-95534846 Neighboring gene Sharpr-MPRA regulatory region 1325 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:95583098-95583762 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:95583763-95584426 Neighboring gene NANOG hESC enhancer GRCh37_chr6:95865708-95866213 Neighboring gene MPRA-validated peak5964 silencer Neighboring gene MPRA-validated peak5965 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:95996896-95997512 Neighboring gene Sharpr-MPRA regulatory region 13210 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17404 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17405 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:96025507-96026447 Neighboring gene MPRA-validated peak5967 silencer Neighboring gene MANEA divergent transcript Neighboring gene mannosidase endo-alpha

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002967.3 

    Range
    101..670
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    95504122..95504691
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    96675069..96675638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)