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CYCSP6 CYCS pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 360159, updated on 10-Oct-2023

Summary

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Official Symbol
CYCSP6provided by HGNC
Official Full Name
CYCS pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:24421
See related
AllianceGenome:HGNC:24421
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HCP6
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Genomic context

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See CYCSP6 in Genome Data Viewer
Location:
2p12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (78412586..78413162, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (78417544..78418120, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (78639712..78640288, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927967 Neighboring gene uncharacterized LOC105374816 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:78262643-78263582 Neighboring gene uncharacterized LOC101927948 Neighboring gene MPRA-validated peak3749 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr2:78557243-78557744 Neighboring gene uncharacterized LOC124906027 Neighboring gene caseinolytic mitochondrial matrix peptidase chaperone subunit X pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr2:78750964-78751194 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:78759892-78760571 Neighboring gene uncharacterized LOC105374820 Neighboring gene uncharacterized LOC105374819

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study. Anney RJ, et al. Am J Med Genet B Neuropsychiatr Genet, 2008 Dec 5. PMID 18951430
  2. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. Zhang Z, et al. Gene, 2003 Jul 17. PMID 12909341
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • cytochrome c, somatic pseudogene 6

Clone Names

  • MGC33502

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002957.3 

    Range
    101..677
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    78412586..78413162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    78417544..78418120 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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