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PPP1R12BP1 protein phosphatase 1 regulatory subunit 12B pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 360021, updated on 10-Oct-2023

Summary

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Official Symbol
PPP1R12BP1provided by HGNC
Official Full Name
protein phosphatase 1 regulatory subunit 12B pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:18498
See related
Ensembl:ENSG00000229238 AllianceGenome:HGNC:18498
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PPP1R12BP; PPP1R12BPY1
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Genomic context

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Location:
Yq11.23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (26277823..26348678, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (27089724..27160580, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (28423970..28494825, complement)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene arginine-glutamic acid dipeptide repeats pseudogene 2 Y-linked Neighboring gene small nucleolar RNA SNORA70 Neighboring gene RNA, U6 small nuclear 1314, pseudogene Neighboring gene uncharacterized LOC105377244 Neighboring gene CYCS pseudogene 48

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. Skaletsky H, et al. Nature, 2003 Jun 19. PMID 12815422

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • protein phosphatase 1, regulatory (inhibitor) subunit 12B Y-linked pseudogene 1
  • protein phosphatase 1, regulatory (inhibitor) subunit 12B pseudogene, Y-linked 1
  • protein phosphatase 1, regulatory subunit 12B pseudogene, Y-linked 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_087935.1 

    Range
    101..70956
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    26277823..26348678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    27089724..27160580 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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