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ATP5PFP1 ATP synthase peripheral stalk subunit F6 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 359997, updated on 10-Oct-2023

Summary

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Official Symbol
ATP5PFP1provided by HGNC
Official Full Name
ATP synthase peripheral stalk subunit F6 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:23933
See related
AllianceGenome:HGNC:23933
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ATP5JP1
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Genomic context

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Location:
Yp11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (6901130..6901467)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (6553458..6553795)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (6769171..6769508)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene sorcin pseudogene 3 Neighboring gene GOT2 pseudogene 5 Neighboring gene amelogenin Y-linked Neighboring gene transducin beta like 1 Y-linked Neighboring gene family with sequence similarity 199, Y-linked, pseudogene Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chrY:6931456-6932655 Neighboring gene G protein-coupled receptor 143 Y-linked pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. Skaletsky H, et al. Nature, 2003 Jun 19. PMID 12815422
  2. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6 pseudogene 1
  • ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002918.4 

    Range
    101..438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    6901130..6901467
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    6553458..6553795
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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