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MRPS6P4 mitochondrial ribosomal protein S6 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 359782, updated on 10-Oct-2023

Summary

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Official Symbol
MRPS6P4provided by HGNC
Official Full Name
mitochondrial ribosomal protein S6 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:29782
See related
AllianceGenome:HGNC:29782
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
12q21.33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (89319299..89319606)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (89301266..89301573)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (89713076..89713383)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378255 Neighboring gene MPRA-validated peak1873 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:89641205-89641806 Neighboring gene MPRA-validated peak1874 silencer Neighboring gene MPRA-validated peak1877 silencer Neighboring gene MPRA-validated peak1878 silencer Neighboring gene RNA, U7 small nuclear 120 pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr12:89697498-89697700 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:89719199-89719702 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6705 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:89743500-89744134 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:89744770-89745404 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4691 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6706 Neighboring gene dual specificity phosphatase 6 Neighboring gene uncharacterized LOC124902980

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. Zhang Z, et al. Genomics, 2003 May. PMID 12706105

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002898.2 

    Range
    101..408
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    89319299..89319606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    89301266..89301573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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