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JCHAINP1 joining chain of multimeric IgA and IgM pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 3513, updated on 10-Oct-2023

Summary

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Official Symbol
JCHAINP1provided by HGNC
Official Full Name
joining chain of multimeric IgA and IgM pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:5714
See related
AllianceGenome:HGNC:5714
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
IGJP1
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Genomic context

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Location:
8q21.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (84979577..84980562, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (85418525..85419510, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (85891812..85892797, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene RALY RNA binding protein like Neighboring gene uncharacterized LOC124902092 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27588 Neighboring gene ACTB pseudogene 6 Neighboring gene solute carrier family 7 member 13 pseudogene Neighboring gene uncharacterized LOC105375933 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27589 Neighboring gene leucine rich repeat and coiled-coil centrosomal protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A processed J chain pseudogene on human chromosome 8 that is shared by several primate species. Max EE, et al. Mol Immunol, 1994 Sep. PMID 7916122

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • immunoglobulin J polypeptide pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009863.3 

    Range
    101..1086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    84979577..84980562 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    85418525..85419510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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