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VENTXP3 VENT homeobox pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 349814, updated on 10-Oct-2023

Summary

Official Symbol
VENTXP3provided by HGNC
Official Full Name
VENT homeobox pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:30902
See related
AllianceGenome:HGNC:30902
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
VENTX2P3
Summary
Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the Vent homeobox gene family. [provided by RefSeq, Jul 2008]
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Genomic context

See VENTXP3 in Genome Data Viewer
Location:
12q21.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (74292265..74294332)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (74266125..74268192)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (74686045..74688112)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2394 Neighboring gene MPRA-validated peak1834 silencer Neighboring gene long intergenic non-protein coding RNA 2882 Neighboring gene SURP and G-patch domain containing 1 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:74564879-74565379 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:74685765-74686413 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:74686414-74687061 Neighboring gene uncharacterized LOC107987178 Neighboring gene uncharacterized LOC124902967

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002911.4 

    Range
    101..2168
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    74292265..74294332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    74266125..74268192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)