SOWAHB sosondowah ankyrin repeat domain family member B [Homo sapiens (human)] - Gene

Summary

Official Symbol: SOWAHBprovided by HGNC
Official Full Name: sosondowah ankyrin repeat domain family member Bprovided by HGNC
Primary source: HGNC:HGNC:32958
See related: Ensembl:ENSG00000186212 AllianceGenome:HGNC:32958
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: ANKRD56
Orthologs: mouse all
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Genomic context

Location:: 4q21.1

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2023_10	current	GRCh38.p14 (GCF_000001405.40)	4	NC_000004.12 (76894152..76898144, complement)
RS_2023_10	current	T2T-CHM13v2.0 (GCF_009914755.1)	4	NC_060928.1 (80234914..80238906, complement)
105.20220307	previous assembly	GRCh37.p13 (GCF_000001405.25)	4	NC_000004.11 (77815305..77819297, complement)

Chromosome 4 - NC_000004.12 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Identification of a Set of Genes Improving Survival Prediction in Kidney Renal Clear Cell Carcinoma through Integrative Reanalysis of Transcriptomic Data.
Title: Identification of a Set of Genes Improving Survival Prediction in Kidney Renal Clear Cell Carcinoma through Integrative Reanalysis of Transcriptomic Data.

Submit: New GeneRIF Correction

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by GOA

Function	Evidence Code	Pubs
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

General protein information

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Preferred Names: ankyrin repeat domain-containing protein SOWAHB

Names: ankyrin repeat domain 56; ankyrin repeat domain-containing protein 56; protein sosondowah homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001029870.3 → NP_001025041.1 ankyrin repeat domain-containing protein SOWAHB

See identical proteins and their annotated locations for NP_001025041.1

Status: VALIDATED

Source sequence(s)

AC104687, BC137255

Consensus CDS

CCDS34017.1

UniProtKB/Swiss-Prot

A6NEL2, B2RP29

Related

ENSP00000334879.2, ENST00000334306.4

Conserved Domains (2) summary

cd00204
Location:630 → 707

ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...

sd00045
Location:631 → 667

ANK; ANK repeat [structural motif]