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SAR1AP3 secretion associated Ras related GTPase 1A pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 344988, updated on 10-Oct-2023

Summary

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Official Symbol
SAR1AP3provided by HGNC
Official Full Name
secretion associated Ras related GTPase 1A pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:32317
See related
AllianceGenome:HGNC:32317
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SAR1P3
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Genomic context

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See SAR1AP3 in Genome Data Viewer
Location:
4q27
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (120341980..120344859)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (123646043..123648922)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (121263135..121266014)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:120987074-120987580 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:120987581-120988086 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21860 Neighboring gene MAD2L1 divergent transcript Neighboring gene mitotic arrest deficient 2 like 1 Neighboring gene LTV1 ribosome biogenesis factor pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:121118839-121118995 Neighboring gene uncharacterized LOC124900771 Neighboring gene Sharpr-MPRA regulatory region 8715 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72414 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72419 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72528 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21861 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:121655223-121655429 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:121662174-121662740 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:121662741-121663307 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21862 Neighboring gene PR/SET domain 5 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72556 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72587 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72607 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72637 Neighboring gene RNA, U6 small nuclear 550, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • SAR1 gene homolog pseudogene 3
  • SAR1 homolog A pseudogene 3
  • SAR1 homolog pseudogene 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009719.2 

    Range
    101..2980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    120341980..120344859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    123646043..123648922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Chemical Information
Molecular Biology Databases