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MRPS18CP6 MRPS18C pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 343901, updated on 10-Oct-2023

Summary

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Official Symbol
MRPS18CP6provided by HGNC
Official Full Name
MRPS18C pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:29747
See related
AllianceGenome:HGNC:29747
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See MRPS18CP6 in Genome Data Viewer
Location:
22q13.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (44483442..44483676, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (44967281..44967515, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (44879322..44879556, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene shisa like 1 Neighboring gene uncharacterized LOC101927499 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44712691-44713192 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44713193-44713692 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44733447-44734210 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44734211-44734974 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:44748529-44749458 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44765925-44766426 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44787184-44788062 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44788063-44788941 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:44791267-44791872 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44839807-44840536 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44840537-44841266 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44843884-44844547 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr22:44844727-44845926 Neighboring gene long intergenic non-protein coding RNA 1656 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19211 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44891229-44892006 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44892007-44892784 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13867 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13868 Neighboring gene retrotransposon Gag like 6 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:44923943-44924102 Neighboring gene uncharacterized LOC105373059 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44939408-44939962 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44939963-44940517 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44941073-44941626

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. Zhang Z, et al. Genomics, 2003 May. PMID 12706105

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • mitochondrial ribosomal protein S18C pseudogene 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002835.4 

    Range
    101..335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    44483442..44483676 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    44967281..44967515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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