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ATP6V1E1P1 ATPase H+ transporting V1 subunit E1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 343515, updated on 10-Oct-2023

Summary

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Official Symbol
ATP6V1E1P1provided by HGNC
Official Full Name
ATPase H+ transporting V1 subunit E1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:859
See related
AllianceGenome:HGNC:859
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ATP6EP1; ATP6V1EP1
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Genomic context

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Location:
1p34.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (42903114..42904112)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (42773590..42774588)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (43368785..43369783)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC339539 Neighboring gene transmembrane channel like 6 pseudogene Neighboring gene makorin ring finger protein 8, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 899 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 900 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 901 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:43392725-43393224 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:43394256-43394898 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:43394899-43395539 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 902 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:43400317-43401109 Neighboring gene solute carrier family 2 member 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 903 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:43406478-43406986 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:43408512-43409020 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 906 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 907 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 908 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:43411987-43412488 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:43412489-43412988 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:43416007-43416542 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 909 Neighboring gene Sharpr-MPRA regulatory region 3978 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:43418797-43419741 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 910 Neighboring gene ATPase H+ transporting V0 subunit c pseudogene 4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 772 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:43424712-43424895 Neighboring gene Sharpr-MPRA regulatory region 619 Neighboring gene SLC2A1 divergent transcript Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:43436637-43437138 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:43437139-43437638 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:43438752-43439252 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:43439253-43439753

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • ATPase, H+ transporting, lysosomal (vacuolar proton pump) 31kD pseudogene 1
  • ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E pseudogene 1
  • ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_016586.2 

    Range
    79..1077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    42903114..42904112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    42773590..42774588
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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