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KRT18P48 keratin 18 pseudogene 48 [ Homo sapiens (human) ]

Gene ID: 340598, updated on 10-Oct-2023

Summary

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Official Symbol
KRT18P48provided by HGNC
Official Full Name
keratin 18 pseudogene 48provided by HGNC
Primary source
HGNC:HGNC:33418
See related
Ensembl:ENSG00000217889 AllianceGenome:HGNC:33418
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Xq28
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (153604496..153605349, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (151878149..151879002, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (152869951..152870804, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene cyclin Q Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21064 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21065 Neighboring gene uncharacterized LOC105373383 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21066 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:152866105-152866606 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:152866607-152867106 Neighboring gene MRFAP1 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21067 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:152888899-152889398 Neighboring gene HNF4 motif-containing MPRA enhancer 232 Neighboring gene dual specificity phosphatase 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_006017.4 

    Range
    1..854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    153604496..153605349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    151878149..151879002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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