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KRT17P5 keratin 17 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 339240, updated on 10-Oct-2023

Summary

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Official Symbol
KRT17P5provided by HGNC
Official Full Name
keratin 17 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:50723
See related
AllianceGenome:HGNC:50723
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See KRT17P5 in Genome Data Viewer
Location:
17p11.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (18422181..18425333)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (18369012..18372164)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (18325495..18328647)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:18315706-18316530 Neighboring gene long intergenic non-protein coding RNA 2076 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:18316531-18317354 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:18321957-18322458 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:18322459-18322958 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 2 Neighboring gene keratin 17 pseudogene 2 Neighboring gene uncharacterized LOC105371570 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:18341877-18342526 Neighboring gene keratin 16 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure and evolution of the Smith-Magenis syndrome repeat gene clusters, SMS-REPs. Park SS, et al. Genome Res, 2002 May. PMID 11997339, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Other Names

  • keratin 14 pseudogene

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_001443.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL353997

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    18422181..18425333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_017363819.1 Reference GRCh38.p14 PATCHES

    Range
    192160..195312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    18369012..18372164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6ZRU5.2 GenPept UniProtKB/Swiss-Prot:Q6ZRU5

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.