U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MESTP1 mesoderm specific transcript pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 338470, updated on 10-Oct-2023

Summary

Official Symbol
MESTP1provided by HGNC
Official Full Name
mesoderm specific transcript pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:29660
See related
AllianceGenome:HGNC:29660
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
6q22.33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (128927756..128930216, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (130120949..130123409, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (129248901..129251361, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377998 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:128976681-128977880 Neighboring gene ribosomal protein L21 pseudogene 64 Neighboring gene NANOG hESC enhancer GRCh37_chr6:129057924-129058437 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:129064821-129065546 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:129065547-129066272 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:129066852-129067489 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:129067490-129068126 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17531 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25043 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25042 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr6:129162326-129163525 Neighboring gene laminin subunit alpha 2 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:129493212-129493926 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:129493927-129494640 Neighboring gene bone morphogenetic protein receptor type 1A pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:129561118-129561327 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:129572793-129572997 Neighboring gene NANOG hESC enhancer GRCh37_chr6:129691636-129692145 Neighboring gene RNA, U6 small nuclear 861, pseudogene

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002694.4 

    Range
    101..2561
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    128927756..128930216 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    130120949..130123409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)