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oaf out at first [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33435, updated on 4-Apr-2024

Summary

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Official Symbol
oafprovided by FlyBase
Official Full Name
out at firstprovided by FlyBase
Primary source
FLYBASE:FBgn0011818
Locus tag
Dmel_CG9884
See related
AllianceGenome:FB:FBgn0011818
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9884; Dmel\CG9884; l(2)22Fb; l(2)ND1; tnd
Summary
Is expressed in several structures, including embryonic/larval nervous system; endoderm anlage; extended germ band embryo; germ layer; and gonad. Orthologous to human OAF (out at first homolog). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
22F4-22F4; 2-6 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (2492955..2498846)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (2492955..2498846)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45286 Neighboring gene SLY-1 homologous Neighboring gene long non-coding RNA:CR44607 Neighboring gene antisense RNA:CR46069 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
out at first
Names
CG9884-PA
CG9884-PB
CG9884-PC
CG9884-PD
near dpp complementation group 1
oaf-PA
oaf-PB
oaf-PC
oaf-PD
transcript near decapentaplegic
transcript-near-decapentaplegic

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    2492955..2498846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_057692.2 → NP_477040.1  out at first, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_477040.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A4V013, Q6NP33
    Related
    FBpp0077456, FBtr0077777
    Conserved Domains (1) summary
    pfam14941
    Location:81 → 332
    OAF; Transcriptional regulator, Out at first

  2. NM_175949.1 → NP_787963.2  out at first, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_787963.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q24556, Q86CS3, Q9NLA6
    Related
    FBpp0077459, FBtr0077780
    Conserved Domains (1) summary
    pfam14941
    Location:81 → 332
    OAF; Transcriptional regulator, Out at first

  3. NM_164489.2 → NP_722815.1  out at first, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_722815.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A4V013, Q6NP33
    Related
    FBpp0077457
    Conserved Domains (1) summary
    pfam14941
    Location:81 → 332
    OAF; Transcriptional regulator, Out at first

  4. NM_164490.1 → NP_722816.1  out at first, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_722816.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A4V013, Q6NP33
    Related
    FBpp0077458, FBtr0077779
    Conserved Domains (1) summary
    pfam14941
    Location:81 → 332
    OAF; Transcriptional regulator, Out at first
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A4V013 A4V013
Q9NLA6.2 Q9NLA6

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