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Gm867 predicted gene 867 [ Mus musculus (house mouse) ]

Gene ID: 333670, updated on 5-Mar-2024

Summary

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Official Symbol
Gm867provided by MGI
Official Full Name
predicted gene 867provided by MGI
Primary source
MGI:MGI:2685713
See related
Ensembl:ENSMUSG00000050157 AllianceGenome:MGI:2685713
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm736
Summary
Orthologous to human C22orf15 (chromosome 22 open reading frame 15). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in liver E14.5 (RPKM 25.5), liver E14 (RPKM 22.3) and 5 other tissues See more
Orthologs
human all
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Genomic context

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Location:
10 C1; 10 38.62 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (75773553..75776508, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (75937719..75940672, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 Neighboring gene matrix metallopeptidase 11 Neighboring gene STARR-positive B cell enhancer ABC_E8863 Neighboring gene STARR-seq mESC enhancer starr_27166 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 10 Neighboring gene STARR-positive B cell enhancer ABC_E11443 Neighboring gene STARR-positive B cell enhancer ABC_E5150 Neighboring gene V-set pre-B cell surrogate light chain 3 Neighboring gene 60S ribosomal protein L27 pseudogene Neighboring gene predicted gene, 40698 Neighboring gene predicted gene 5134

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A mutation in the pericentrin gene causes abnormal interneuron migration to the olfactory bulb in mice. Endoh-Yamagami S, et al. Dev Biol, 2010 Apr 1. PMID 20096683
  2. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  3. A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Hansen J, et al. Proc Natl Acad Sci U S A, 2003 Aug 19. PMID 12904583, Free PMC Article
  4. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  5. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein C22orf15 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277132.1 → NP_001264061.1  uncharacterized protein C22orf15 homolog

    Status: VALIDATED

    Source sequence(s)
    AC134382
    Consensus CDS
    CCDS88025.1
    UniProtKB/TrEMBL
    A0A1W2P7T4
    Related
    ENSMUSP00000151812.2, ENSMUST00000219979.2
    Conserved Domains (1) summary
    pfam15874
    Location:7 → 97
    Il2rg; Putative Interleukin 2 receptor, gamma chain

RNA

  1. NR_153332.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC134382, BB739864, BY368856
    Related
    ENSMUST00000059658.6

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    75773553..75776508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006513801.5 → XP_006513864.1  uncharacterized protein C22orf15 homolog isoform X2

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 124
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  2. XM_006513802.5 → XP_006513865.3  uncharacterized protein C22orf15 homolog isoform X4

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 109
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  3. XM_036155864.1 → XP_036011757.1  uncharacterized protein C22orf15 homolog isoform X3

    UniProtKB/TrEMBL
    A0A1W2P7T4
    Conserved Domains (1) summary
    pfam15874
    Location:7 → 97
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  4. XM_036155863.1 → XP_036011756.1  uncharacterized protein C22orf15 homolog isoform X1

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 124
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  5. XM_017314017.3 → XP_017169506.3  uncharacterized protein C22orf15 homolog isoform X1

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 124
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  6. XM_006513799.5 → XP_006513862.3  uncharacterized protein C22orf15 homolog isoform X1

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 124
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  7. XM_036155866.1 → XP_036011759.1  uncharacterized protein C22orf15 homolog isoform X8

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 105
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  8. XM_006513800.5 → XP_006513863.3  uncharacterized protein C22orf15 homolog isoform X1

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 124
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  9. XM_036155865.1 → XP_036011758.1  uncharacterized protein C22orf15 homolog isoform X7

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 104
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  10. XM_006513798.5 → XP_006513861.3  uncharacterized protein C22orf15 homolog isoform X1

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 124
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  11. XM_006513805.5 → XP_006513868.1  uncharacterized protein C22orf15 homolog isoform X6

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 104
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  12. XM_011243497.4 → XP_011241799.1  uncharacterized protein C22orf15 homolog isoform X5

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 121
    Il2rg; Putative Interleukin 2 receptor, gamma chain

  13. XM_036155867.1 → XP_036011760.1  uncharacterized protein C22orf15 homolog isoform X9

    Conserved Domains (1) summary
    pfam15874
    Location:34 → 104
    Il2rg; Putative Interleukin 2 receptor, gamma chain

RNA

  1. XR_004936206.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001037714.2: Suppressed sequence

    Description
    NM_001037714.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version

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