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CG17078 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33195, updated on 27-Mar-2024

Summary

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Official Symbol
CG17078provided by FlyBase
Primary source
FLYBASE:FBgn0086855
Locus tag
Dmel_CG17078
See related
AllianceGenome:FB:FBgn0086855
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-21Cb; Dmel\CG17078
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Genomic context

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Location:
21B7-21B7; 2-0.5 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (274740..278234, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (274740..278234, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Dihydrouridine synthase 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mushroom body miniature Neighboring gene smoothened Neighboring gene antisense RNA:CR46262 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Drosophila smoothened gene encodes a seven-pass membrane protein, a putative receptor for the hedgehog signal. Alcedo J, et al. Cell, 1996 Jul 26. PMID 8706127
  2. Identification of mushroom body miniature, a zinc-finger protein implicated in brain development of Drosophila. Raabe T, et al. Proc Natl Acad Sci U S A, 2004 Sep 28. PMID 15375215, Free PMC Article
  3. smoothened encodes a receptor-like serpentine protein required for hedgehog signalling. van den Heuvel M, et al. Nature, 1996 Aug 8. PMID 8700230
  4. Protein landscape at Drosophila melanogaster telomere-associated sequence repeats. Antão JM, et al. Mol Cell Biol, 2012 Jun. PMID 22493064, Free PMC Article
  5. Expression-Based Cell Lineage Analysis in Drosophila Through a Course-Based Research Experience for Early Undergraduates. Olson JM, et al. G3 (Bethesda), 2019 Nov 5. PMID 31690598, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG17078-PB
CG17078-PC
CG17078-PD
CG17078-PE
anon-21Cb

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    274740..278234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001272883.2 → NP_001259812.1  uncharacterized protein Dmel_CG17078, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259812.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B5RJI5, Q1EC00, Q9VPM7
    Conserved Domains (1) summary
    cl02541
    Location:93 → 159
    CIDE_N; CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with ...

  2. NM_001272882.1 → NP_001259811.1  uncharacterized protein Dmel_CG17078, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259811.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PAY6, Q1EC00
    Conserved Domains (1) summary
    cl02541
    Location:88 → 154
    CIDE_N; CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with ...

  3. NM_001272881.1 → NP_001259810.1  uncharacterized protein Dmel_CG17078, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259810.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PDS0, Q1EC00
    Conserved Domains (1) summary
    cl02541
    Location:91 → 157
    CIDE_N; CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with ...

  4. NM_134668.2 → NP_608512.2  uncharacterized protein Dmel_CG17078, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608512.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B5RJI5, Q1EC00, Q9VPM7
    Conserved Domains (1) summary
    cl02541
    Location:93 → 159
    CIDE_N; CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PAY6 M9PAY6
M9PDS0 M9PDS0
Q9VPM7 Q9VPM7

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