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Slc2a4rg-ps Slc2a4 regulator, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 329584, updated on 8-Feb-2024

Summary

Official Symbol
Slc2a4rg-psprovided by MGI
Official Full Name
Slc2a4 regulator, pseudogeneprovided by MGI
Primary source
MGI:MGI:3651388
See related
Ensembl:ENSMUSG00000121871 AllianceGenome:MGI:3651388
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm14462; C430010C01
Expression
Ubiquitous expression in thymus adult (RPKM 9.8), spleen adult (RPKM 7.6) and 28 other tissues See more
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Genomic context

Location:
2 H4; 2 103.63 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (181026043..181029389)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (181384250..181387596)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4532 Neighboring gene ADP-ribosylation factor related protein 1 Neighboring gene zinc finger, CCCH-type with G patch domain Neighboring gene zinc finger and BTB domain containing 46 Neighboring gene STARR-positive B cell enhancer ABC_E11178 Neighboring gene Lck interacting transmembrane adaptor 1 Neighboring gene predicted gene, 22708 Neighboring gene STARR-positive B cell enhancer mm9_chr2:181218272-181218572 Neighboring gene STARR-seq mESC enhancer starr_06754 Neighboring gene abhydrolase domain containing 16B

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045164.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK082896, AL928965, AV344219, CX218513
    Related
    ENSMUST00000127559.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    181026043..181029389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)