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CG13404 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32382, updated on 4-Apr-2024

Summary

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Official Symbol
CG13404provided by FlyBase
Primary source
FLYBASE:FBgn0030559
Locus tag
Dmel_CG13404
See related
AllianceGenome:FB:FBgn0030559
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG13404
Summary
Predicted to be involved in positive regulation of plasminogen activation. Predicted to be integral component of plasma membrane. Is expressed in adult head. Orthologous to human PLGRKT (plasminogen receptor with a C-terminal lysine). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
12E6-12E6; 1-48 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (14264737..14266250, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (14158770..14160283, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR46473 Neighboring gene uncharacterized protein Neighboring gene mushroom body defect Neighboring gene uncharacterized protein Neighboring gene Tyrosine aminotransferase Neighboring gene narrow abdomen Neighboring gene Mucin 12Ea Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Natural genetic variation in Drosophila melanogaster reveals genes associated with Coxiella burnetii infection. Guzman RM, et al. Genetics, 2021 Mar 31. PMID 33789347, Free PMC Article
  2. Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis. Lin WH, et al. Dis Model Mech, 2017 Feb 1. PMID 28067623, Free PMC Article
  3. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article
  4. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
  5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in positive regulation of plasminogen activation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in positive regulation of plasminogen activation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13404-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    14264737..14266250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_132726.3 → NP_572954.2  uncharacterized protein Dmel_CG13404 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572954.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V627, Q9VY41
    Conserved Domains (1) summary
    pfam10166
    Location:12 → 137
    DUF2368; Uncharacterized conserved protein (DUF2368)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VY41 Q9VY41

Gene LinkOut

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