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pira pirate [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32229, updated on 4-Apr-2024

Summary

Official Symbol
piraprovided by FlyBase
Official Full Name
pirateprovided by FlyBase
Primary source
FLYBASE:FBgn0030420
Locus tag
Dmel_CG12717
See related
AllianceGenome:FB:FBgn0030420
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG12717; Dmel\CG12717
Summary
Predicted to enable SUMO-specific endopeptidase activity and SUMO-specific isopeptidase activity. Involved in central nervous system projection neuron axonogenesis and dendritic spine morphogenesis. Located in cytoplasm and nucleus. Orthologous to human SENP6 (SUMO specific peptidase 6) and SENP7 (SUMO specific peptidase 7). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
11B16-11B16; 1-39 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (12760642..12763611, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (12654675..12657644, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44619 Neighboring gene VSR interacting RNA Neighboring gene PAICS bifunctional enzyme Neighboring gene 1-Acylglycerol-3-phosphate O-acyltransferase 1 Neighboring gene uncharacterized protein Neighboring gene Phosphodiesterase 9 Neighboring gene Neprilysin 6

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables SUMO-specific endopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables cysteine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables deSUMOylase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
involved_in central nervous system projection neuron axonogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in dendritic spine morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein desumoylation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein desumoylation ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
pirate
Names
CG12717-PA
CG12717-PB
pira-PA
pira-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    12760642..12763611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298238.1NP_001285167.1  pirate, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285167.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q29QU9, Q9VYJ5
    Conserved Domains (2) summary
    pfam05466
    Location:122319
    BASP1; Brain acid soluble protein 1 (BASP1 protein)
    cl23802
    Location:396585
    Peptidase_C48; Ulp1 protease family, C-terminal catalytic domain
  2. NM_132599.3NP_572827.1  pirate, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572827.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q29QU9, Q9VYJ5
    Related
    FBpp0073537
    Conserved Domains (2) summary
    pfam05466
    Location:122319
    BASP1; Brain acid soluble protein 1 (BASP1 protein)
    cl23802
    Location:396585
    Peptidase_C48; Ulp1 protease family, C-terminal catalytic domain