U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

A330023F24Rik RIKEN cDNA A330023F24 gene [ Mus musculus (house mouse) ]

Gene ID: 320977, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
A330023F24Rikprovided by MGI
Official Full Name
RIKEN cDNA A330023F24 geneprovided by MGI
Primary source
MGI:MGI:2443958
See related
Ensembl:ENSMUSG00000096929 AllianceGenome:MGI:2443958
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C030002C11Rik
Expression
Biased expression in cortex adult (RPKM 16.0), frontal lobe adult (RPKM 15.4) and 9 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
1 H6; 1 98.4 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (194699707..194720216)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (195017399..195037908)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_03500 Neighboring gene predicted gene, 39748 Neighboring gene CD34 antigen Neighboring gene predicted gene, 16897 Neighboring gene predicted gene, 53516 Neighboring gene STARR-seq mESC enhancer starr_03501 Neighboring gene STARR-seq mESC enhancer starr_03502 Neighboring gene STARR-seq mESC enhancer starr_03503 Neighboring gene microRNA 29b-2 Neighboring gene microRNA 29c Neighboring gene CD46 antigen, complement regulatory protein Neighboring gene STARR-positive B cell enhancer ABC_E11117 Neighboring gene complement C3b/C4b receptor 1 like Neighboring gene STARR-seq mESC enhancer starr_03504 Neighboring gene predicted gene, 32313 Neighboring gene complement receptor 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015566.2 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC139206, AC162692
    Related
    ENSMUST00000181273.7

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    194699707..194720216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.