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D5Ertd579e DNA segment, Chr 5, ERATO Doi 579, expressed [ Mus musculus (house mouse) ]

Gene ID: 320661, updated on 5-Mar-2024

Summary

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Official Symbol
D5Ertd579eprovided by MGI
Official Full Name
DNA segment, Chr 5, ERATO Doi 579, expressedprovided by MGI
Primary source
MGI:MGI:1261849
See related
Ensembl:ENSMUSG00000029190 AllianceGenome:MGI:1261849
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Kiaa0232; 9030221A05Rik; A930018H20Rik
Summary
Predicted to enable ATP binding activity. Orthologous to human KIAA0232 (KIAA0232). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in cerebellum adult (RPKM 12.8), CNS E14 (RPKM 10.6) and 28 other tissues See more
Orthologs
human all
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Genomic context

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Location:
5 B3; 5 19.18 cM
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (36757827..36854083, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (36600483..36696732, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E3572 Neighboring gene coiled-coil domain containing 96 Neighboring gene TBC1 domain family, member 14 Neighboring gene predicted gene, 32528 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:36872352-36872539 Neighboring gene STARR-positive B cell enhancer ABC_E6323 Neighboring gene STARR-positive B cell enhancer ABC_E10317 Neighboring gene STARR-positive B cell enhancer ABC_E4753 Neighboring gene predicted gene, 32584 Neighboring gene predicted gene, 24878 Neighboring gene predicted gene, 25767 Neighboring gene VISTA enhancer mm1054 Neighboring gene predicted gene, 32725 Neighboring gene predicted gene, 33017

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, et al. DNA Res, 2003 Feb 28. PMID 12693553
  2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249
  3. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Tanaka TS, et al. Proc Natl Acad Sci U S A, 2000 Aug 1. PMID 10922068, Free PMC Article
  4. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  5. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables molecular_function ND
No biological Data available
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein KIAA0232

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081232.3 → NP_001074701.3  uncharacterized protein KIAA0232

    Status: VALIDATED

    Source sequence(s)
    AK139370, BB630109, BC094673
    Consensus CDS
    CCDS39073.2
    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3, E9QPJ5
    Related
    ENSMUSP00000031091.10, ENSMUST00000031091.13
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1299
    DUF4603; Domain of unknown function (DUF4603)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    36757827..36854083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011240744.4 → XP_011239046.1  uncharacterized protein KIAA0232 isoform X1

    See identical proteins and their annotated locations for XP_011239046.1

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1330
    DUF4603; Domain of unknown function (DUF4603)

  2. XM_036165218.1 → XP_036021111.1  uncharacterized protein KIAA0232 isoform X15

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1299
    DUF4603; Domain of unknown function (DUF4603)

  3. XM_036165216.1 → XP_036021109.1  uncharacterized protein KIAA0232 isoform X13

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1312
    DUF4603; Domain of unknown function (DUF4603)

  4. XM_036165209.1 → XP_036021102.1  uncharacterized protein KIAA0232 isoform X5

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1312
    DUF4603; Domain of unknown function (DUF4603)

  5. XM_006503992.4 → XP_006504055.1  uncharacterized protein KIAA0232 isoform X2

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1322
    DUF4603; Domain of unknown function (DUF4603)

  6. XM_011240750.4 → XP_011239052.1  uncharacterized protein KIAA0232 isoform X9

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1307
    DUF4603; Domain of unknown function (DUF4603)

  7. XM_036165212.1 → XP_036021105.1  uncharacterized protein KIAA0232 isoform X8

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1320
    DUF4603; Domain of unknown function (DUF4603)

  8. XM_011240747.3 → XP_011239049.1  uncharacterized protein KIAA0232 isoform X3

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1320
    DUF4603; Domain of unknown function (DUF4603)

  9. XM_011240742.3 → XP_011239044.1  uncharacterized protein KIAA0232 isoform X1

    See identical proteins and their annotated locations for XP_011239044.1

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1330
    DUF4603; Domain of unknown function (DUF4603)

  10. XM_011240743.3 → XP_011239045.1  uncharacterized protein KIAA0232 isoform X1

    See identical proteins and their annotated locations for XP_011239045.1

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1330
    DUF4603; Domain of unknown function (DUF4603)

  11. XM_011240746.4 → XP_011239048.1  uncharacterized protein KIAA0232 isoform X1

    See identical proteins and their annotated locations for XP_011239048.1

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1330
    DUF4603; Domain of unknown function (DUF4603)

  12. XM_030254575.2 → XP_030110435.1  uncharacterized protein KIAA0232 isoform X2

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1322
    DUF4603; Domain of unknown function (DUF4603)

  13. XM_011240745.4 → XP_011239047.1  uncharacterized protein KIAA0232 isoform X1

    See identical proteins and their annotated locations for XP_011239047.1

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1330
    DUF4603; Domain of unknown function (DUF4603)

  14. XM_036165213.1 → XP_036021106.1  uncharacterized protein KIAA0232 isoform X10

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:2 → 1209
    DUF4603; Domain of unknown function (DUF4603)

  15. XM_036165215.1 → XP_036021108.1  uncharacterized protein KIAA0232 isoform X12

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:2 → 1201
    DUF4603; Domain of unknown function (DUF4603)

  16. XM_036165220.1 → XP_036021113.1  uncharacterized protein KIAA0232 isoform X17

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:2 → 1178
    DUF4603; Domain of unknown function (DUF4603)

  17. XM_011240748.3 → XP_011239050.1  uncharacterized protein KIAA0232 isoform X4

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1307
    DUF4603; Domain of unknown function (DUF4603)

  18. XM_036165210.1 → XP_036021103.1  uncharacterized protein KIAA0232 isoform X6

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3, E9QPJ5
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1299
    DUF4603; Domain of unknown function (DUF4603)

  19. XM_036165214.1 → XP_036021107.1  uncharacterized protein KIAA0232 isoform X11

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1322
    DUF4603; Domain of unknown function (DUF4603)

  20. XM_011240749.3 → XP_011239051.1  uncharacterized protein KIAA0232 isoform X7

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1330
    DUF4603; Domain of unknown function (DUF4603)

  21. XM_036165211.1 → XP_036021104.1  uncharacterized protein KIAA0232 isoform X6

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3, E9QPJ5
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1299
    DUF4603; Domain of unknown function (DUF4603)

  22. XM_036165219.1 → XP_036021112.1  uncharacterized protein KIAA0232 isoform X16

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:2 → 1178
    DUF4603; Domain of unknown function (DUF4603)

  23. XM_036165217.1 → XP_036021110.1  uncharacterized protein KIAA0232 isoform X14

    UniProtKB/Swiss-Prot
    Q3U6T9, Q3UTK1, Q3UYU6, Q504Z4, Q80U59, Q80XC4, Q8BJI7, Q8BZV3
    UniProtKB/TrEMBL
    B9EKS3
    Conserved Domains (1) summary
    pfam15376
    Location:2 → 1186
    DUF4603; Domain of unknown function (DUF4603)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_177221.2: Suppressed sequence

    Description
    NM_177221.2: This RefSeq was permanently suppressed because its 3'' sequence is intronic and lacks support.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q80U59.2 GenPept UniProtKB/Swiss-Prot:Q80U59

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