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A230028O05Rik RIKEN cDNA A230028O05 gene [ Mus musculus (house mouse) ]

Gene ID: 319487, updated on 8-Feb-2024

Summary

Official Symbol
A230028O05Rikprovided by MGI
Official Full Name
RIKEN cDNA A230028O05 geneprovided by MGI
Primary source
MGI:MGI:2442126
See related
Ensembl:ENSMUSG00000096960 AllianceGenome:MGI:2442126
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

See A230028O05Rik in Genome Data Viewer
Location:
16 B1; 16 16.79 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (24878389..24887808)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (25059639..25069058)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene LIM domain containing preferred translocation partner in lipoma Neighboring gene predicted gene, 22672 Neighboring gene predicted gene, 52245 Neighboring gene STARR-seq mESC enhancer starr_40468 Neighboring gene STARR-seq mESC enhancer starr_40471 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:25055618-25055819 Neighboring gene STARR-seq mESC enhancer starr_40472 Neighboring gene predicted gene, 52256 Neighboring gene predicted gene, 41435

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040374.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK038535
    Related
    ENSMUST00000181655.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    24878389..24887808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)