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4932441J04Rik RIKEN cDNA 4932441J04 gene [ Mus musculus (house mouse) ]

Gene ID: 319216, updated on 8-Feb-2024

Summary

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Official Symbol
4932441J04Rikprovided by MGI
Official Full Name
RIKEN cDNA 4932441J04 geneprovided by MGI
Primary source
MGI:MGI:2441691
See related
Ensembl:ENSMUSG00000097216 AllianceGenome:MGI:2441691
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
5 C1; 5 31.11 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (57727426..57875261, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (57570084..57717919, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_13124 Neighboring gene STARR-seq mESC enhancer starr_13125 Neighboring gene DnaJ (Hsp40) homolog, subfamily A, member 3 pseudogene Neighboring gene STARR-seq mESC enhancer starr_13126 Neighboring gene synaptosomal-associated protein 23 pseudogene Neighboring gene STARR-seq mESC enhancer starr_13127 Neighboring gene STARR-seq mESC enhancer starr_13128 Neighboring gene STARR-seq mESC enhancer starr_13129 Neighboring gene IMP1 inner mitochondrial membrane peptidase-like pseudogene Neighboring gene STARR-seq mESC enhancer starr_13130 Neighboring gene STARR-seq mESC enhancer starr_13131 Neighboring gene STARR-seq mESC enhancer starr_13132 Neighboring gene protocadherin 7 Neighboring gene predicted gene, 17977 Neighboring gene predicted gene, 54319

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015588.2 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK039574
    Related
    ENSMUST00000180708.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    57727426..57875261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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