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GSTA6P glutathione S-transferase alpha 6, pseudogene [ Homo sapiens (human) ]

Gene ID: 2942, updated on 10-Oct-2023

Summary

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Official Symbol
GSTA6Pprovided by HGNC
Official Full Name
glutathione S-transferase alpha 6, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:4630
See related
Ensembl:ENSG00000223622 AllianceGenome:HGNC:4630
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GSTAP1
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Genomic context

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Location:
6p12.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (52805446..52813462, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (52644216..52652229, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (52670244..52678260, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase alpha 12, pseudogene Neighboring gene glutathione S-transferase alpha 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24690 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92146 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92147 Neighboring gene glutathione S-transferase alpha 5 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92148 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92149 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92150 Neighboring gene glutathione S-transferase alpha 11, pseudogene Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92153 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:52734542-52734752

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure and function of the 5' flanking sequences of the human alpha class glutathione S-transferase genes. Suzuki T, et al. Biochem Biophys Res Commun, 1994 May 16. PMID 8185623
  2. Association of glutathione-S-transferase-P1 (GST-P1) polymorphisms with bronchopulmonary dysplasia. Manar MH, et al. J Perinatol, 2004 Jan. PMID 14726935
  3. Structure and organization of the human alpha class glutathione S-transferase genes and related pseudogenes. Suzuki T, et al. Genomics, 1993 Dec. PMID 8307579

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The polymorphism of DSTAP1 are associated with the development of bronchopulmonary dysplasia.
    Title: Association of glutathione-S-transferase-P1 (GST-P1) polymorphisms with bronchopulmonary dysplasia.
Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • glutathione S-transferase A pseudogene 1
  • glutathione S-transferase alpha pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001135.3 

    Range
    101..8117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    52805446..52813462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    52644216..52652229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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