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TMED10P1 transmembrane p24 trafficking protein 10 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 286102, updated on 10-Oct-2023

Summary

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Official Symbol
TMED10P1provided by HGNC
Official Full Name
transmembrane p24 trafficking protein 10 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:30754
See related
AllianceGenome:HGNC:30754
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
p23; TMP21; TMED10; S31I125; TMED10P; Tmp-21-I; Tmp21-II; p24delta; S31III125; p24delta1
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Genomic context

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Location:
8q24.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (144994865..144998897)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (146170009..146174042)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (146220251..146224283)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene zinc finger protein 250 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:146126789-146127391 Neighboring gene uncharacterized LOC124902042 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:146127392-146127995 Neighboring gene zinc finger protein 16 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19717 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28110 Neighboring gene zinc finger protein 252, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:146228590-146229166 Neighboring gene ZNF252P antisense RNA 1 Neighboring gene endogenous retrovirus group K member 6 Env polyprotein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comparative study of rat and human Tmp21 (p23) reveals the pseudogene-like features of human Tmp21-II. Hörer J, et al. DNA Seq, 1999. PMID 10376215
  2. Tmp21 and p24A, two type I proteins enriched in pancreatic microsomal membranes, are members of a protein family involved in vesicular trafficking. Blum R, et al. J Biol Chem, 1996 Jul 19. PMID 8663407
  3. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Castello A, et al. Cell, 2012 Jun 8. PMID 22658674

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Other Names

  • 21 kDa transmembrane-trafficking protein
  • Tmp21-II , transcribed pseudogene
  • Transmembrane emp24 domain-containing protein 10
  • Transmembrane protein Tmp21
  • p24 family protein delta-1
  • transmembrane emp24-like trafficking protein 10 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002807.4 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AF235103, KF458889

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    144994865..144998897
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    146170009..146174042
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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