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LINC00692 long intergenic non-protein coding RNA 692 [ Homo sapiens (human) ]

Gene ID: 285326, updated on 10-Oct-2023

Summary

Official Symbol
LINC00692provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 692provided by HGNC
Primary source
HGNC:HGNC:27708
See related
Ensembl:ENSG00000230891 AllianceGenome:HGNC:27708
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 2.9) See more
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Genomic context

See LINC00692 in Genome Data Viewer
Location:
3p24.2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (25858532..25873695, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (25861289..25876477, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (25900023..25915186, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:25831060-25831589 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19612 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19613 Neighboring gene 3-oxoacyl-ACP synthase, mitochondrial Neighboring gene uncharacterized LOC105377000 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19614 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:25893740-25894939 Neighboring gene NANOG hESC enhancer GRCh37_chr3:25900147-25901106 Neighboring gene uncharacterized LOC124909357 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:25947555-25948220 Neighboring gene ribulose-5-phosphate-3-epimerase pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_034055.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC103588, BC033370
    Related
    ENST00000451284.6

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    25858532..25873695 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    25861289..25876477 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)