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Ccdc50-ps Ccdc50 retrotransposed pseudogene [ Mus musculus (house mouse) ]

Gene ID: 277707, updated on 8-Feb-2024

Summary

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Official Symbol
Ccdc50-psprovided by MGI
Official Full Name
Ccdc50 retrotransposed pseudogeneprovided by MGI
Primary source
MGI:MGI:3651098
See related
AllianceGenome:MGI:3651098
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm12699; EG277707
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Genomic context

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Location:
4 C6; 4 45.76 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (100423767..100425351, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (100566570..100568154, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene SCAN domain containing 3 pseudogene Neighboring gene STARR-seq mESC enhancer starr_10880 Neighboring gene ubiquitin-conjugating enzyme E2U (putative) Neighboring gene ubiquitin-conjugating enzyme E2U (putative), opposite strand Neighboring gene predicted gene 12700 Neighboring gene predicted gene, 46888

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • coiled-coil domain containing 50 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005190.5 

    Range
    101..1685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    100423767..100425351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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