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HSFY1P1 HSFY1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 27437, updated on 10-Oct-2023

Summary

Official Symbol
HSFY1P1provided by HGNC
Official Full Name
HSFY1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:1846
See related
Ensembl:ENSG00000290408 AllianceGenome:HGNC:1846
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CECR8; HSFYL1; HSFYP1; NCRNA00016
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
22q11.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (16827474..16829335)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (17504161..17506023)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (17308364..17310225)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene MPRA-validated peak4439 silencer Neighboring gene long intergenic non-protein coding RNA 1665 Neighboring gene XK related 3 Neighboring gene glycoprotein M6B pseudogene 3 Neighboring gene zinc finger protein 402, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • cat eye syndrome chromosome region, candidate 8 (non-protein coding)
  • heat shock transcription factor, Y-linked 1 pseudogene 1
  • heat shock transcription factor, Y-linked-like 1, pseudogene
  • heat shock transcription factor, Y-linked-like pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003607.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AY026053
    Related
    ENST00000425038.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    16827474..16829335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    17504161..17506023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)