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Slc14a2 solute carrier family 14 (urea transporter), member 2 [ Mus musculus (house mouse) ]

Gene ID: 27411, updated on 11-Apr-2024

Summary

Official Symbol
Slc14a2provided by MGI
Official Full Name
solute carrier family 14 (urea transporter), member 2provided by MGI
Primary source
MGI:MGI:1351653
See related
Ensembl:ENSMUSG00000024552 AllianceGenome:MGI:1351653
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
UT-A1; UT-A3
Summary
Enables urea transmembrane transporter activity. Predicted to be involved in urea transmembrane transport. Predicted to be integral component of membrane. Is expressed in metanephros and nervous system. Orthologous to human SLC14A2 (solute carrier family 14 member 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in kidney adult (RPKM 38.3), testis adult (RPKM 8.0) and 1 other tissue See more
Orthologs
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Genomic context

Location:
18 E3; 18 52.53 cM
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (78189359..78640165, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (78146144..78596950, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_45139 Neighboring gene sialic acid binding Ig-like lectin 15 Neighboring gene solute carrier family 14 (urea transporter), member 1 Neighboring gene predicted gene, 36338 Neighboring gene STARR-positive B cell enhancer mm9_chr18:78408899-78409200 Neighboring gene STARR-seq mESC enhancer starr_45142 Neighboring gene STARR-seq mESC enhancer starr_45143 Neighboring gene VISTA enhancer mm173 Neighboring gene predicted gene, 54027 Neighboring gene STARR-seq mESC enhancer starr_45144 Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene RIKEN cDNA 4931439C15 gene Neighboring gene STARR-seq mESC enhancer starr_45145 Neighboring gene predicted gene, 26430 Neighboring gene STARR-seq mESC enhancer starr_45147 Neighboring gene predicted gene, 23895 Neighboring gene SET binding protein 1 Neighboring gene STARR-seq mESC enhancer starr_45148 Neighboring gene STARR-seq mESC enhancer starr_45149 Neighboring gene STARR-positive B cell enhancer ABC_E1963 Neighboring gene STARR-seq mESC enhancer starr_45150 Neighboring gene STARR-seq mESC enhancer starr_45151 Neighboring gene STARR-positive B cell enhancer ABC_E7614

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Clone Names

  • MGC183591

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables cell adhesion molecule binding ISO
Inferred from Sequence Orthology
more info
PubMed 
enables urea transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables urea transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in urea transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within urea transmembrane transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in urea transport ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in apical plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in basolateral plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
urea transporter 2
Names
solute carrier family 14 member 2
urea transporter, kidney

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001110273.2NP_001103743.1  urea transporter 2 isoform c

    See identical proteins and their annotated locations for NP_001103743.1

    Status: VALIDATED

    Source sequence(s)
    AC112792
    Consensus CDS
    CCDS89283.1
    UniProtKB/TrEMBL
    Q8BMD1
    Related
    ENSMUSP00000157855.2, ENSMUST00000237290.2
    Conserved Domains (1) summary
    pfam03253
    Location:58353
    UT; Urea transporter
  2. NM_001110274.2NP_001103744.1  urea transporter 2 isoform d

    See identical proteins and their annotated locations for NP_001103744.1

    Status: VALIDATED

    Source sequence(s)
    AC112792
    Consensus CDS
    CCDS50331.1
    UniProtKB/TrEMBL
    A0A0R4J213
    Related
    ENSMUSP00000126416.2, ENSMUST00000163367.3
    Conserved Domains (1) summary
    pfam03253
    Location:1274
    UT; Urea transporter
  3. NM_030683.4NP_109608.1  urea transporter 2 isoform b

    See identical proteins and their annotated locations for NP_109608.1

    Status: VALIDATED

    Source sequence(s)
    AC112792, AC140455, AC145554, AC151578
    Consensus CDS
    CCDS89284.1
    UniProtKB/TrEMBL
    A0A494BAL3
    Related
    ENSMUSP00000158141.2, ENSMUST00000235389.2
    Conserved Domains (1) summary
    pfam03253
    Location:128412
    UT; Urea transporter
  4. NM_207651.4NP_997534.2  urea transporter 2 isoform a

    See identical proteins and their annotated locations for NP_997534.2

    Status: VALIDATED

    Source sequence(s)
    AC112792, AC140455, AC145554, AC151578
    Consensus CDS
    CCDS29361.1
    UniProtKB/Swiss-Prot
    B2RWS5, Q8K5D0, Q8R4T9, Q9ES04, Q9ES05
    UniProtKB/TrEMBL
    G5E849
    Related
    ENSMUSP00000157851.2, ENSMUST00000237674.2
    Conserved Domains (1) summary
    pfam03253
    Location:591886
    UT; Urea transporter

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    78189359..78640165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006526488.1XP_006526551.1  urea transporter 2 isoform X1

    Conserved Domains (1) summary
    pfam03253
    Location:128384
    UT; Urea transporter
  2. XM_017317915.1XP_017173404.1  urea transporter 2 isoform X2

    Conserved Domains (1) summary
    pfam03253
    Location:1246
    UT; Urea transporter