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Magel2 MAGE family member L2 [ Mus musculus (house mouse) ]

Gene ID: 27385, updated on 9-May-2024

Summary

Official Symbol
Magel2provided by MGI
Official Full Name
MAGE family member L2provided by MGI
Primary source
MGI:MGI:1351648
See related
Ensembl:ENSMUSG00000056972 AllianceGenome:MGI:1351648
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ns7; nM15; NDNL1; Mage-l2
Summary
Predicted to enable ubiquitin-protein transferase activity. Involved in negative regulation of transcription, DNA-templated and regulation of circadian rhythm. Acts upstream of or within positive regulation of actin nucleation. Located in cytoplasm and nucleus. Is expressed in several structures, including brain; egg cylinder; future spinal cord; limb bud; and reproductive system. Used to study Prader-Willi syndrome. Human ortholog(s) of this gene implicated in Schaaf-Yang syndrome. Orthologous to human MAGEL2 (MAGE family member L2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
7 C; 7 34.37 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (62026727..62031388)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (62376979..62381640)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 42395 Neighboring gene predicted gene, 32061 Neighboring gene necdin, MAGE family member Neighboring gene makorin, ring finger protein, 3 Neighboring gene STARR-seq mESC enhancer starr_18999 Neighboring gene paternally expressed 12

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2)  1 citation
  • Endonuclease-mediated (5) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables ubiquitin-protein transferase activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in endosome ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
part_of retromer complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
MAGE-like protein 2
Names
melanoma antigen, family L, 2
melanoma antigen-like gene 2
necdin-like 1
protein nS7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013779.2NP_038807.4  MAGE-like protein 2

    Status: VALIDATED

    Source sequence(s)
    AC156555
    Consensus CDS
    CCDS52264.1
    UniProtKB/Swiss-Prot
    F8WIA8, Q9QZ04
    Related
    ENSMUSP00000079265.6, ENSMUST00000080403.7
    Conserved Domains (2) summary
    PHA03247
    Location:190675
    PHA03247; large tegument protein UL36; Provisional
    pfam01454
    Location:10591223
    MAGE; MAGE family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    62026727..62031388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)