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Kics2 KICSTOR subunit 2 [ Mus musculus (house mouse) ]

Gene ID: 270802, updated on 5-Mar-2024

Summary

Official Symbol
Kics2provided by MGI
Official Full Name
KICSTOR subunit 2provided by MGI
Primary source
MGI:MGI:2670984
See related
Ensembl:ENSMUSG00000053684 AllianceGenome:MGI:2670984
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
E030027L10
Summary
Predicted to be involved in cellular response to starvation; negative regulation of TORC1 signaling; and protein localization to lysosome. Predicted to be located in intercellular bridge and lysosome. Predicted to be part of KICSTOR complex. Orthologous to human KICS2 (KICSTOR subunit 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 3.1), lung adult (RPKM 2.9) and 28 other tissues See more
Orthologs
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Genomic context

Location:
10 D2; 10 69.94 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (121575835..121588770)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (121739930..121752865)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA D930020B18 gene Neighboring gene STARR-seq mESC enhancer starr_28105 Neighboring gene predicted gene, 35865 Neighboring gene SLIT-ROBO Rho GTPase activating protein 1 Neighboring gene predicted gene, 46183 Neighboring gene STARR-seq mESC enhancer starr_28112 Neighboring gene predicted gene, 51787

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in cellular response to amino acid starvation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cellular response to amino acid starvation ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to glucose starvation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cellular response to glucose starvation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of TORC1 signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of TORC1 signaling ISO
Inferred from Sequence Orthology
more info
 
involved_in protein localization to lysosome IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein localization to lysosome ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of KICSTOR complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of KICSTOR complex ISO
Inferred from Sequence Orthology
more info
 
located_in intercellular bridge ISO
Inferred from Sequence Orthology
more info
 
located_in lysosome ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
KICSTOR subunit 2
Names
KICSTOR complex protein C12orf66 homolog
UPF0536 protein C12orf66 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001359720.1NP_001346649.1  KICSTOR subunit 2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC124992, AK087110, BC065058, BY284944
    Consensus CDS
    CCDS88094.1
    UniProtKB/TrEMBL
    D3Z5F2
    Related
    ENSMUSP00000117249.2, ENSMUST00000136432.2
    Conserved Domains (1) summary
    pfam09404
    Location:1308
    DUF2003; Eukaryotic protein of unknown function (DUF2003)
  2. NM_173022.3NP_766610.2  KICSTOR subunit 2 isoform 1

    See identical proteins and their annotated locations for NP_766610.2

    Status: VALIDATED

    Source sequence(s)
    AC124992, AK087110, BC065058
    Consensus CDS
    CCDS24213.1
    UniProtKB/Swiss-Prot
    Q3TE08, Q3TRB8, Q6P1I3, Q8C334
    Related
    ENSMUSP00000070834.8, ENSMUST00000065600.8
    Conserved Domains (1) summary
    pfam09404
    Location:10444
    DUF2003; Eukaryotic protein of unknown function (DUF2003)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    121575835..121588770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)