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PAFAH1B1P2 platelet activating factor acetylhydrolase 1b regulatory subunit 1 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 27002, updated on 10-Oct-2023

Summary

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Official Symbol
PAFAH1B1P2provided by HGNC
Official Full Name
platelet activating factor acetylhydrolase 1b regulatory subunit 1 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:8578
See related
AllianceGenome:HGNC:8578
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LIS2P; PAFAH1P2
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Genomic context

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See PAFAH1B1P2 in Genome Data Viewer
Location:
2q13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (111383527..111385143)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (111809301..111810917)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (112141104..112142720)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene MIR4435-2 host gene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:112059022-112059522 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:112062300-112062800 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:112062801-112063301 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:112067720-112068228 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:112068229-112068736 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:112074438-112074970 Neighboring gene ribosomal protein S14 pseudogene 4 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:112077463-112078099 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:112078100-112078735 Neighboring gene microRNA 4435-2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:112193024-112193588 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:112193589-112194153 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:112210455-112211189 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:112211190-112211923 Neighboring gene uncharacterized LOC124906065 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:112244635-112245487 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:112252044-112253243 Neighboring gene serous ovarian cancer associated RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. LIS2, gene and pseudogene, homologous to LIS1 (lissencephaly 1), located on the short and long arms of chromosome 2. Reiner O, et al. Genomics, 1995 Nov 20. PMID 8586424
  2. Identification of two paralogous regions mapping to the short and long arms of human chromosome 2 comprising LIS1 pseudogenes. Fogli A, et al. Cytogenet Cell Genet, 1999. PMID 10575211

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_003167.5 

    Range
    101..1717
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    111383527..111385143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    111809301..111810917
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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