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Vmn2r57 vomeronasal 2, receptor 57 [ Mus musculus (house mouse) ]

Gene ID: 269902, updated on 11-Apr-2024

Summary

Official Symbol
Vmn2r57provided by MGI
Official Full Name
vomeronasal 2, receptor 57provided by MGI
Primary source
MGI:MGI:3703084
See related
Ensembl:ENSMUSG00000066537 AllianceGenome:MGI:3703084
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG269902; D430014M15
Summary
Predicted to enable G protein-coupled receptor activity. Predicted to be integral component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
7 B3; 7 28.25 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (41049156..41098065, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (41399732..41448641, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene expressed sequence AI987944 Neighboring gene STARR-positive B cell enhancer ABC_E3715 Neighboring gene predicted gene 17102 Neighboring gene STARR-seq mESC enhancer starr_18727 Neighboring gene STARR-seq mESC enhancer starr_18728 Neighboring gene expressed sequence AW146154 Neighboring gene ornithine decarboxylase, structural 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_18729 Neighboring gene predicted gene 6871

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
vomeronasal 2, receptor 57
Names
vomeronasal receptor Vmn2r57

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177764.4NP_808432.2  vomeronasal 2, receptor 57 precursor

    Status: PROVISIONAL

    Source sequence(s)
    AC162792
    Consensus CDS
    CCDS52210.1
    UniProtKB/TrEMBL
    A0A3B2WDB9, L7N269
    Related
    ENSMUSP00000125817.2, ENSMUST00000165029.3
    Conserved Domains (4) summary
    cd06365
    Location:36506
    PBP1_Pheromone_receptor; Ligand-binding domain of the V2R phermone receptor, a member of the family C receptors within the G-protein coupled receptor superfamily
    pfam00003
    Location:601835
    7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
    pfam01094
    Location:77470
    ANF_receptor; Receptor family ligand binding region
    pfam07562
    Location:515566
    NCD3G; Nine Cysteines Domain of family 3 GPCR

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    41049156..41098065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)