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Ccdc32 coiled-coil domain containing 32 [ Mus musculus (house mouse) ]

Gene ID: 269336, updated on 5-Mar-2024

Summary

Official Symbol
Ccdc32provided by MGI
Official Full Name
coiled-coil domain containing 32provided by MGI
Primary source
MGI:MGI:2685477
See related
Ensembl:ENSMUSG00000039983 AllianceGenome:MGI:2685477
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm631
Summary
Involved in cilium organization. Orthologous to human CCDC32 (coiled-coil domain containing 32). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in frontal lobe adult (RPKM 9.8), cortex adult (RPKM 9.4) and 28 other tissues See more
Orthologs
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Genomic context

Location:
2 E5; 2 59.82 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (118848260..118859887, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (119017779..119029406, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene 14089 Neighboring gene ubiquinol-cytochrome c reductase hinge protein, pseudogene 2 Neighboring gene STARR-positive B cell enhancer ABC_E4492 Neighboring gene STARR-positive B cell enhancer ABC_E146 Neighboring gene STARR-positive B cell enhancer ABC_E1595 Neighboring gene RNA pseudouridylate synthase domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E1596 Neighboring gene nuclear encoded tRNA serine 7 (anticodon GCT)

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

Clone Names

  • MGC60849

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cell projection organization IEA
Inferred from Electronic Annotation
more info
 
involved_in cilium organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cilium organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in head development ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of clathrin-dependent endocytosis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in clathrin-coated pit ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 32
Names
uncharacterized protein C15orf57 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199310.2NP_955014.2  coiled-coil domain-containing protein 32

    See identical proteins and their annotated locations for NP_955014.2

    Status: VALIDATED

    Source sequence(s)
    AK132604, AK147152, BY086759, BY262121
    Consensus CDS
    CCDS50671.1
    UniProtKB/Swiss-Prot
    Q5U667, Q7TPZ0, Q8BS39
    UniProtKB/TrEMBL
    Q3UHY7
    Related
    ENSMUSP00000038589.8, ENSMUST00000036470.14
    Conserved Domains (1) summary
    pfam14989
    Location:18164
    CCDC32; Coiled-coil domain containing 32

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    118848260..118859887 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011239574.1XP_011237876.1  coiled-coil domain-containing protein 32 isoform X1

    See identical proteins and their annotated locations for XP_011237876.1

    UniProtKB/Swiss-Prot
    Q5U667, Q7TPZ0, Q8BS39
    UniProtKB/TrEMBL
    Q3UHY7
    Conserved Domains (1) summary
    pfam14989
    Location:18164
    CCDC32; Coiled-coil domain containing 32