U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Mroh5 maestro heat-like repeat family member 5 [ Mus musculus (house mouse) ]

Gene ID: 268816, updated on 13-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
Mroh5provided by MGI
Official Full Name
maestro heat-like repeat family member 5provided by MGI
Primary source
MGI:MGI:2685474
See related
Ensembl:ENSMUSG00000072487 AllianceGenome:MGI:2685474
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm628
Summary
Orthologous to human MROH5 (maestro heat like repeat family member 5 (gene/pseudogene)). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 18.8) See more
Orthologs
human all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
15 D3; 15 34.06 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (73658785..73711520, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (73786936..73839671, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 20 Neighboring gene STARR-positive B cell enhancer mm9_chr15:73548453-73548754 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:73562951-73563152 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:73565412-73565613 Neighboring gene STARR-seq mESC enhancer starr_38975 Neighboring gene protein tyrosine phosphatase 4a3 Neighboring gene predicted gene, 22106 Neighboring gene NADH:ubiquinone oxidoreductase subunit B4C Neighboring gene predicted gene 6569 Neighboring gene predicted gene, 52173 Neighboring gene STARR-seq mESC enhancer starr_38977 Neighboring gene predicted gene, 32355

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
maestro heat-like repeat family member 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033365.3 → NP_001028537.1  maestro heat-like repeat family member 5 isoform 2

    See identical proteins and their annotated locations for NP_001028537.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate in-frame exon and contains another alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
    Source sequence(s)
    AC119884, AK158799
    Consensus CDS
    CCDS27520.1
    UniProtKB/TrEMBL
    B7ZWG8, Q3TY91
    Related
    ENSMUSP00000071366.6, ENSMUST00000071419.12

  2. NM_001368162.1 → NP_001355091.1  maestro heat-like repeat family member 5 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AK158799, BC150895
    Consensus CDS
    CCDS88777.1
    UniProtKB/TrEMBL
    B7ZWG8, B9EKG2
    Related
    ENSMUSP00000105648.3, ENSMUST00000110021.3

  3. NM_001428951.1 → NP_001415880.1  maestro heat-like repeat family member 5 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC116769, AC119884

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    73658785..73711520 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools
Miscellaneous