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SNORD56 small nucleolar RNA, C/D box 56 [ Homo sapiens (human) ]

Gene ID: 26793, updated on 10-Oct-2023

Summary

Official Symbol
SNORD56provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 56provided by HGNC
Primary source
HGNC:HGNC:10206
See related
Ensembl:ENSG00000229686 AllianceGenome:HGNC:10206
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U56; RNU56
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Genomic context

See SNORD56 in Genome Data Viewer
Location:
20p13
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (2656624..2656694)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (2687091..2687161)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (2637270..2637340)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene NOP56 ribonucleoprotein Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:2636106-2636623 Neighboring gene small nucleolar RNA, H/ACA box 51 Neighboring gene small nucleolar RNA, C/D box 86 Neighboring gene small nucleolar RNA, C/D box 57 Neighboring gene MPRA-validated peak4124 silencer Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:2643139-2643926

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • RNA, U56 small nuclear

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002739.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    X96655
    Related
    ENST00000413522.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    2656624..2656694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    2687091..2687161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)