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EEDP1 EED pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 266694, updated on 10-Oct-2023

Summary

Official Symbol
EEDP1provided by HGNC
Official Full Name
EED pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:55143
See related
Ensembl:ENSG00000224942 AllianceGenome:HGNC:55143
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This locus is 89-91% identical to the embryonic ectoderm development gene on chromosome 11. This locus has a single exon and has no evidence of transcription, and so it is thought to be a pseudogene. [provided by RefSeq, Jul 2008]
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Genomic context

Location:
Xq27.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (140397057..140398589)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (138708984..138710516)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (139479222..139480754)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:139174023-139174994 Neighboring gene HUWE1 associated protein modifying stress responses 2 Neighboring gene OCT4 hESC enhancer GRCh37_chrX:139215004-139215505 Neighboring gene uncharacterized LOC105373343 Neighboring gene VISTA enhancer hs667 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:139355782-139356282 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:139356271-139357470 Neighboring gene NANOG hESC enhancer GRCh37_chrX:139431717-139432218 Neighboring gene NANOG hESC enhancer GRCh37_chrX:139436606-139437472 Neighboring gene NANOG hESC enhancer GRCh37_chrX:139519673-139520247 Neighboring gene U7 small nuclear RNA Neighboring gene ribosomal protein S17 pseudogene 17

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002372.6 

    Range
    101..1633
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    140397057..140398589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    138708984..138710516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)